586 research outputs found

    Reflected Spectrally Negative Stable Processes and their Governing Equations

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    This paper explicitly computes the transition densities of a spectrally negative stable process with index greater than one, reflected at its infimum. First we derive the forward equation using the theory of sun-dual semigroups. The resulting forward equation is a boundary value problem on the positive half-line that involves a negative Riemann-Liouville fractional derivative in space, and a fractional reflecting boundary condition at the origin. Then we apply numerical methods to explicitly compute the transition density of this space-inhomogeneous Markov process, for any starting point, to any desired degree of accuracy. Finally, we discuss an application to fractional Cauchy problems, which involve a positive Caputo fractional derivative in time

    Characterization and cloning of fasciclin I and fasciclin II glycoproteins in the grasshopper

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    Monoclonal antibodies were previously used to identify two glycoproteins, called fasciclin I and II (70 and 95 kDa, respectively), which are expressed on different subsets of axon fascicles in the grasshopper (Schistocerca americana) embryo. Here the monoclonal antibodies were used to purify these two membrane-associated glycoproteins for further characterization. Fasciclin II appears to be an integral membrane protein, where fasciclin I is an extrinsic membrane protein. The amino acid sequences of the amino terminus and fragments of both proteins were determined. Using synthetic oligonucleotide probes and antibody screening, we isolated genomic and cDNA clones. Partial DNA sequences of these clones indicate that they encode fasciclins I and II

    Collapse of the vortex-lattice inductance and shear modulus at the melting transition in untwinned YBa2Cu3O7\rm YBa_2Cu_3O_7

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    The complex resistivity ρ^(ω)\hat{\rho}(\omega) of the vortex lattice in an untwinned crystal of 93-K YBa2Cu3O7\rm YBa_2Cu_3O_7 has been measured at frequencies ω/2π\omega/2\pi from 100 kHz to 20 MHz in a 2-Tesla field Hc\bf H\parallel c, using a 4-probe RF transmission technique that enables continuous measurements versus ω\omega and temperature TT. As TT is increased, the inductance Ls(ω)=Imρ^(ω)/ω{\cal L}_s(\omega) ={\rm Im} \hat{\rho}(\omega)/ \omega increases steeply to a cusp at the melting temperature TmT_m, and then undergoes a steep collapse consistent with vanishing of the shear modulus c66c_{66}. We discuss in detail the separation of the vortex-lattice inductance from the `volume' inductance, and other skin-depth effects. To analyze the spectra, we consider a weakly disordered lattice with a low pin density. Close fits are obtained to ρ1(ω)\rho_1(\omega) over 2 decades in ω\omega. Values of the pinning parameter κ\kappa and shear modulus c66c_{66} obtained show that c66c_{66} collapses by over 4 decades at TmT_m, whereas κ\kappa remains finite.Comment: 11 pages, 8 figures, Phys. Rev. B, in pres

    Top Quark Physics at the LHC: A Review of the First Two Years

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    This review summarizes the highlights in the area of top quark physics obtained with the two general purpose detectors ATLAS and CMS during the first two years of operation of the Large Hadron Collider LHC. It covers the 2010 and 2011 data taking periods, where the LHC provided pp collisions at a center-of-mass energy of sqrt(s)=7 TeV. Measurements are presented of the total and differential top quark pair production cross section in many different channels, the top quark mass and various other properties of the top quark and its interactions, for instance the charge asymmetry. Measurements of single top quark production and various searches for new physics involving top quarks are also discussed. The already very precise experimental data are in good agreement with the standard model.Comment: 107 pages, invited review for Int. J. Mod. Phys. A, v2 is identical to v1 except for the addition of the table of content

    A single glycan at the 99-loop of human kallikrein-related Peptidase 2 regulates activation and enzymatic activity

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    Human kallikrein-related peptidase 2 (KLK2) is a key serine protease in semen liquefaction and prostate cancer together with KLK3/prostate-specific antigen. In order to decipher the function of its potential N-glycosylation site, we produced pro-KLK2 in Leishmania tarentolae cells and compared it with its non-glycosylated counterpart from Escherichia coli expression. Mass spectrometry revealed that Asn-95 carries a core glycan, consisting of two GlcNAc and three hexoses. Autocatalytic activation was retarded in glyco-pro-KLK2, whereas the activated glyco-form exhibited an increased proteolytic resistance. The specificity patterns obtained by the PICS (proteomic identification of protease cleavage sites) method are similar for both KLK2 variants, with a major preference for P1-Arg. However, glycosylation changes the enzymatic activity of KLK2 in a drastically substrate-dependent manner. Although glyco-KLK2 has a considerably lower catalytic efficiency than glycan-free KLK2 toward peptidic substrates with P2-Phe, the situation was reverted toward protein substrates, such as glyco-pro-KLK2 itself. These findings can be rationalized by the glycan-carrying 99-loop that prefers to cover the active site like a lid. By contrast, the non-glycosylated 99-loop seems to favor a wide open conformation, which mostly increases the apparent affinity for the substrates (i.e. by a reduction of Km). Also, the cleavage pattern and kinetics in autolytic inactivation of both KLK2 variants can be explained by a shift of the target sites due to the presence of the glycan. These striking effects of glycosylation pave the way to a deeper understanding of kallikrein-related peptidase biology and pathology.(VLID)239213

    Structural determinants of specificity and regulation of activity in the allosteric loop network of human KLK8/neuropsin

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    Human KLK8/neuropsin, a kallikrein-related serine peptidase, is mostly expressed in skin and the hippocampus regions of the brain, where it regulates memory formation by synaptic remodeling. Substrate profiles of recombinant KLK8 were analyzed with positional scanning using fluorogenic tetrapeptides and the proteomic PICS approach, which revealed the prime side specificity. Enzyme kinetics with optimized substrates showed stimulation by Ca2+ and inhibition by Zn2+, which are physiological regulators. Crystal structures of KLK8 with a ligand-free active site and with the inhibitor leupeptin explain the subsite specificity and display Ca2+ bound to the 75-loop. The variants D70K and H99A confirmed the antagonistic role of the cation binding sites. Molecular docking and dynamics calculations provided insights in substrate binding and the dual regulation of activity by Ca2+ and Zn2+, which are important in neuron and skin physiology. Both cations participate in the allosteric surface loop network present in related serine proteases. A comparison of the positional scanning data with substrates from brain suggests an adaptive recognition by KLK8, based on the tertiary structures of its targets. These combined findings provide a comprehensive picture of the molecular mechanisms underlying the enzyme activity of KLK8.(VLID)276376

    The status of GEO 600

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    The GEO 600 laser interferometer with 600m armlength is part of a worldwide network of gravitational wave detectors. GEO 600 is unique in having advanced multiple pendulum suspensions with a monolithic last stage and in employing a signal recycled optical design. This paper describes the recent commissioning of the interferometer and its operation in signal recycled mode
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